.. See the NOTICE file distributed with this work for additional information
   regarding copyright ownership.

   Licensed under the Apache License, Version 2.0 (the "License");
   you may not use this file except in compliance with the License.
   You may obtain a copy of the License at

       http://www.apache.org/licenses/LICENSE-2.0

   Unless required by applicable law or agreed to in writing, software
   distributed under the License is distributed on an "AS IS" BASIS,
   WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
   See the License for the specific language governing permissions and
   limitations under the License.

.. ensembl-anno documentation master file, created by
   sphinx-quickstart on Fri Sep  1 12:25:36 2023.
   You can adapt this file completely to your liking, but it should at least
   contain the root `toctree` directive.

========================================
Ensembl-anno
========================================

Anno tool kit


Contents
--------
Check out :ref:`installation <install>` section for further information on how 
to install the project.

.. toctree::
   :maxdepth: 1
   :caption: Index

   install
   license

   cmsearch
   cpg
   dust
   eponine
   genblast
   minimap
   red
   repeatmasker
   scallop
   star
   stringtie
   trf
   trnascan
   
Indices and tables
==================

* :ref:`genindex`
* :ref:`modindex`
* :ref:`search`