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Ensembl Anno

  • Installation
  • Configuration
  • Pipeline
  • Wrapper
  • Examples
    • Analysis Modules
    • References
  • Installation
  • Configuration
  • Pipeline
  • Wrapper
  • Examples
  • Analysis Modules
  • References

Section Navigation

  • Red
  • Dust
  • Trf
  • Repeatmasker
  • Cpg
  • Eponine
  • Cmsearch
  • Trnascan
  • Star
  • Stringtie
  • Scallop
  • Minimap
  • Genblast
  • Miniprot
  • Analysis Modules

Analysis Modules#

The following sections describe each analysis available in Ensembl Anno.

Repeat annotation#

  • Red
  • Dust
  • Trf
  • Repeatmasker

Simple feature annotation#

  • Cpg
  • Eponine

Small ncRNA annotation#

  • Cmsearch
  • Trnascan

Transcriptomic annotation#

  • Star
  • Stringtie
  • Scallop
  • Minimap

Protein annotation#

  • Genblast
  • Miniprot

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  • Repeat annotation
  • Simple feature annotation
  • Small ncRNA annotation
  • Transcriptomic annotation
  • Protein annotation
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